Digital Transcriptome Subtraction Tools

For SAGE Tag Sequences from Conjunctival Carcinoma Libraries:

Feng H, Taylor JL, Benos PV, Newton R, Waddell K, Lucas SB, Chang Y, and Moore PS. Human Transcriptome subtraction using short sequence tags to search for tumor viruses in conjunctival carcinoma. J Virol. 2007 Oct:81 (20):11332-40.
[Full Text] | [PubMed]






For 454 Sequences from Merkel Cell Carcinoma Libraries:

Feng H, Shuda M, Chang Y and Moore PS. Clonal Integration of a Polyomavirus in Merkel Cell Carcinoma. Science. 2008 319(5866): 1096-1100.
[Full Text] | [PubMed]